SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    444676, 414802, 433182, 441236, 442349, 
    413775, 421121, 449116, 415507, 430647, 
    452052, 445229
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00069

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost": 0.050158501,
    "nested_loop": [
      {
        "table": {
          "table_name": "cscart_product_prices",
          "access_type": "range",
          "possible_keys": [
            "usergroup",
            "product_id",
            "lower_limit",
            "usergroup_id"
          ],
          "key": "usergroup",
          "key_length": "9",
          "used_key_parts": ["product_id", "usergroup_id", "lower_limit"],
          "loops": 1,
          "rows": 24,
          "cost": 0.04252208,
          "filtered": 49.99988174,
          "attached_condition": "cscart_product_prices.lower_limit = 1 and cscart_product_prices.product_id in (444676,414802,433182,441236,442349,413775,421121,449116,415507,430647,452052,445229) and cscart_product_prices.usergroup_id in (0,1)"
        }
      }
    ]
  }
}

Result

product_id price
413775 1094.84000000
414802 1808.21000000
415507 363.58000000
421121 951.66000000
430647 772.27000000
433182 255.40000000
441236 691.73000000
442349 1121.74000000
444676 1660.91000000
445229 1249.76000000
449116 1067.65000000
452052 1731.12000000